Thanks. After downloading AmberTools-1.2.tar.bz2, things with amber10
distribution went well
and tests were passed while after making test.serial.QMMM
following was the only possible failure found in TEST_FAILURES.diff file
possible FAILURE: check mdout.tip5p.dif
/home/ssa/amber10/test/tip5p
180,181d179
< EKCMT = 0.2952 VIRIAL = 9.6699 VOLUME =
0.0001
< Density =
0.
---------------------------------------
It seems completed or still there is some gap? Above possible failure is
going to make a bigger problem ahead in managing TIP5P Box.
Best regards,
On Wed, Jan 27, 2010 at 10:04 AM, case <case.biomaps.rutgers.edu> wrote:
> On Wed, Jan 27, 2010, sikander azam wrote:
> >
> > After successfully installing ambertools at 5th step of Ambertools manual
> in
> > section 1.2, I think I should not go to 6th and 7th step if dont need mpi
> > run or should I?
>
> This is correct.
>
> >
> > When I am trying to go to install amber10 distribution, it is giving me
> > following error
> >
> > *Configuring netcdf; (may be time-consuming)
> > ./configure_amber: line 1211: cd: netcdf/src: No such file or directory
>
> You need to download and untar AmberTools-1.2.tar.bz2, available here:
>
> http://ambermd.org/downloads/AmberTools-1.2.tar.bz2
>
> ...dac
>
>
> _______________________________________________
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> http://lists.ambermd.org/mailman/listinfo/amber
>
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Received on Thu Jan 28 2010 - 05:30:03 PST
