Dear Amber Developer
I had a problem with use of VMD. I loaded with my prmtop using AMBER7 parm
and mdcrd file using AMBER coordinates with periodic box. I found that one
bond becomes around 6 angstrom, even that vmd show a bond like a elongated
bond. what should I do so that vmd shows it like a broken bond and not like
a elongated bond. One more thing I uses RESP charges calculated using
Gaussian03.
Thank you in advance
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Sat Jan 23 2010 - 01:30:03 PST
