Re: [AMBER] how to combine MD trajectories with two different time steps from Jayalakshmi Sridhar on 2010-01-14 (Amber Archive Jan 2010)

From: Jayalakshmi Sridhar <jsridhar.xula.edu>
Date: Thu, 14 Jan 2010 12:19:44 -0600

<div style="font-family: 'Times New Roman'; font-size: 1 6px;"> I am not very familiar with trajin command writing . Can you give me an example? thanks. On 01/14/10, Carlos Simmerling <carlos.simmerling.gmail.com> w rote:<blockquotecite="mid:6b135e7c1001141016p2fab1 a99s23a6e881c5d5b71d.mail.gmail.com" class="iwcQuote" styl e="border-left: 1px solid rgb(0, 0, 255); padding-left: 13 px; margin-left: 0pt;" type="cite"><div class="mim epart text plain">you can vary the stride in each trajin command to give constant time interval. On Thu, Ja= n
 14, 2010 at 12:59 PM, Jayalakshmi Sridhar <jsridhar.xul a.edu> wrote: > > Dear Am ber Users, > I have set of 15 MD trajectories whic= h
 I need to combine and analyze. The > first 6 . mdcrd and .out files have a time step of 0.2ps to a total of 0.5ns . > The next 9 files have a time step of 5 ps to a total of 3.5ns. Will it be > possible to combin= e
 these trajectories and analyze them together? Thanks for & gt; the help. > Jaya. ><= br
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Received on Thu Jan 14 2010 - 10:30:03 PST