Well, when I continued to run 'make -f Makefile_at' I didn't go through. The
error messages are:
make[1]:gfortran: Command not found
make[1]: *** [ambpdb.o] Error 127
make[1]: Leaving directory '/cygdrive/a/amber11/src/etc'make: *** [serial]
Error 2
What can I do to fix the errors? Thanks!
Lixia
On Mon, Jan 4, 2010 at 1:20 PM, Lixia Jin Day <ljin12.asu.edu> wrote:
> Hi,
> I am trying to install amertools on my computer under cygwin.
> As I ran ./configure gnu, I got the message. It looks I can continue, but
> want to know what the error message mean and how they matter for my future
> applications. Thank you!
>
> Lixia
>
> Setting AMBERHOME to /cygdrive/d/amber11
>
> Could not find the X11 libraries; you may need to edit config.h
> to set the XHOME and XLIBS variables.
> Warning: the X11 libraries are not in the usual location !
> To search for them try the command: locate libXt
> On new Fedora OS's install the libXt-devel libXext-devel
> libX11-devel libICE-devel libSM-devel packages.
> On old Fedora OS's install the xorg-x11-devel package.
> On RedHat OS's install the XFree86-devel package.
> On Ubuntu OS's install the xorg-dev package.
> For the moment Amber will be configured not to build XLEaP.
>
> Obtaining the gnu suite version:
> gcc -v
> The version is 3.4.4
>
> Testing the gcc compiler:
> gcc -DUSE_AMBER_C9XCOMPLEX -DSYSV -D_FILE_OFFSET_BITS=64
> -D_LARGEFILE_SOURCE -o testp testp.c
> OK
>
> Validating the C++ compiler version:
> g++ -v
> The version is 3.4.4
> OK
>
> Testing the gfortran compiler:
> gfortran -O0 -o testp testp.f
> Unable to compile a Fortran program using gfortran -O0
> We will be unable to compile sqm
>
> Testing flex:
> OK
>
> Configuring NetCDF; (may be time-consuming)
>
> Error: NetCDF configure returned 1
> NetCDF configure failed! Check the netcdf_config.log file.
> Continuing but NetCDF will be skipped.
>
> The configuration file, config.h, was successfully created.
>
> The next step is to type 'make -f Makefile_at'
>
>
>
--
http://public.fotki.com/lily1907/
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Received on Mon Jan 04 2010 - 13:00:02 PST
