Re: [AMBER] Re: EEL = *************

From: case <case.biomaps.rutgers.edu>
Date: Thu, 10 Dec 2009 15:13:15 -0500

On Tue, Dec 08, 2009, Taufik Al-Sarraj wrote:
>
> During minimization of an inhomogeneous system i get a very high energy.
>
> "NSTEP ENERGY RMS GMAX NAME NUMBER
> 900 -4.9358E+07 3.0838E+11 4.2742E+13 H36c 2659

You probably have two atoms almost on top of one another; run a slightly
shorter minimization, save the coordinates, and look for close contacts.

...good luck...dac


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Received on Thu Dec 10 2009 - 12:30:02 PST
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