Dear users:
I am doing MM_PBSA calculation, but there are two small molecules ( two
ligands) in my complex.
How should I deal with the parameters, for example:
PREFIX snapshot
PATH ./
#
COMPLEX 1
RECEPTOR 1
LIGAND 1
#
COMPT ./parm_com.top
RECPT ./parm_rec.top
LIGPT ./parm_lig.top
Should I just change the LIGAND 2 ,and add another LIGPT ./top file?
Thanks!
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Received on Tue Sep 29 2009 - 19:00:01 PDT
