i also had the same problem.... so i tried mpich2 and it worked
thanks
abhishek
--- On Tue, 29/9/09, Pradipta Bandyopadhyay <pradipta_b.mail.jnu.ac.in> wrote:
> From: Pradipta Bandyopadhyay <pradipta_b.mail.jnu.ac.in>
> Subject: [AMBER] Problem in compiling AMBER9 in parallel !
> To: amber.ambermd.org
> Date: Tuesday, 29 September, 2009, 1:04 PM
> Dear All,
>
> I have been trying to compile AMBER9 in a
> parallel in 64 bit linux machine.
>
> uname -a gives
>
> Linux upoe.jnu.ac.in 2.6.18-128.1.14.el5 #1 SMP Wed Jun 17
> 06:38:05 EDT 2009 x86_64 x86_64 x86_64 GNU/Linux
>
>
> I have followed the instructions given in the 'INSTALL'
> file in AMBER.
>
> I have compiled openmpi
>
> Then I have set the correct MPI_HOME and the updated path
> and LD_LIBRARY_PATH
>
> I used
>
> ./configure openmpi ifort_x86_64
>
> make parallel
>
> However, it can not read the openmpi include files. (ifort
> -c -w95 -mp1 -O0 -FR -o evb_init.o
> _evb_init.f
> _evb_init.f(171): error #5102: Cannot open include file
> 'mpif-common.h')
>
> Although the file is in $MPI_HOME/include
>
> Has somebody faced the same problem?
>
> thanks,
>
> Pradipta
>
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
Send free SMS to your Friends on Mobile from your Yahoo! Messenger. Download Now! http://messenger.yahoo.com/download.php
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Tue Sep 29 2009 - 10:30:02 PDT
