> loadMol2 ligand.mol2 (where ligand.mol2 is created by antechamber) OR
> loadAmberPrep ligand.prepi (where ligand.prepi is created by antechamber)
I think both these lines MUST be included, hence it is not "OR" but "AND". When I tried without the prepi line but only the mol2 line, it did not work.
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Received on Mon Sep 14 2009 - 13:42:33 PDT