[AMBER] symbol lookup error

From: Bala subramanian <bala.biophysics.gmail.com>
Date: Tue, 1 Sep 2009 09:43:51 +0100

Friends,

We have installed amber9 in a SGI altix machine running with SUSE 10. I
submitted the job with the following command. The job stops throwing an
error message.

mpirun -np 12 sander.MPI -O -i eq.in -c eq66.rst -p ALL.top -o eq67.out &

I get the following error. Someone please write how i can resolve the mpd
hosts problem.

WARNING: Can't read mpd.hosts for list of hosts, start only on current
sander.MPI: symbol lookup error: sander.MPI: undefined symbol: mpi_init_
sander.MPI: symbol lookup error: sander.MPI: undefined symbol: mpi_init_
sander.MPI: symbol lookup error: sander.MPI: undefined symbol: mpi_init_
sander.MPI: symbol lookup error: sander.MPI: undefined symbol: mpi_init_
sander.MPI: symbol lookup error: sander.MPI: undefined symbol: mpi_init_
sander.MPI: symbol lookup error: sander.MPI: undefined symbol: mpi_init_
sander.MPI: symbol lookup error: sander.MPI: undefined symbol: mpi_init_
sander.MPI: symbol lookup error: sander.MPI: undefined symbol: mpi_init_
sander.MPI: symbol lookup error: sander.MPI: undefined symbol: mpi_init_
sander.MPI: symbol lookup error: sander.MPI: undefined symbol: mpi_init_
sander.MPI: symbol lookup error: sander.MPI: undefined symbol: mpi_init_
sander.MPI: symbol lookup error: sander.MPI: undefined symbol: mpi_init_
Thanks in advance,
Bala
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Wed Sep 02 2009 - 23:07:07 PDT
Custom Search