[AMBER] What is the meaning of "rms first *"

From: Catein Catherine <askamber23.hotmail.com>
Date: Fri, 31 Jul 2009 04:49:17 +0100

Dear Sir/Madam,


Should we expect the rotation and translation motion of whole system removed by "rms first *" command in PCA analysis? What is the * stands for?


If not, what should we do to remove the rotation and translation motion of the system before doing PCA analysis?


Best regards and many thanks in advanced,



With Windows Live, you can organize, edit, and share your photos.
AMBER mailing list
Received on Wed Aug 19 2009 - 19:53:32 PDT
Custom Search