Hi Sergey,
I dont think any changes in when the output file is written have been
introduced from amber 8 to 10. It still writes to .out whenever there is
something to write. Is it possible that you are seeing some kind of
OS-dependent buffering? Maybe there was a change in your cluster queueing
system?
Regards,
Thomas
On Tue, May 19, 2009 3:33 am, Sergey Samsonov wrote:
> Dear AMBERs,
>
> I have AMBER 10 installed and it runs properly. Previously I used AMBER
> 8 version and I found a difference in output writing: the whole output
> file (.out) is written after the run is completed and not by each step
> of writing. Is it possible to change so that I could look at output
> file each ntpr number of steps as it was by default in AMBER 8?
>
> Thank you and best regards,
>
> Sergey
>
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>
Dr. Thomas Steinbrecher
BioMaps Institute
Rutgers University
610 Taylor Rd.
Piscataway, NJ 08854
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Received on Wed May 20 2009 - 17:29:35 PDT
