There is no workaround, other than having intel fix their compiler; the
easiest and most reasonable thing to do is to install ifort 10.1.021 and use
that. Sometimes the latest release of a software package is not the best...
Regards - Bob Duke
----- Original Message -----
From: "German Erlenkamp" <german.erlenkamp.pharmazie.uni-halle.de>
To: "AMBER Mailing List" <amber.ambermd.org>
Sent: Tuesday, May 05, 2009 9:07 AM
Subject: Re: [AMBER] Problems with PMEMD installation for AMBER10
> Yes, I got Version 11 of the ifort compiler.
> Is there another workaround for this problem, or must I drop back to
> version 10?
>
> Thanks
>
> German
>
> * Robert Duke; Dienstag, den 05. Mai 2009
>> Do you perhaps have a version 11 of ifort? (do ifort -V to see your
>> version). Problems with version 11 of ifort have been reported by other
>> users (this is a compiler bug, not a pmemd bug). The solution is to drop
>> back to version 10 of ifort - I know that version 10.1.021 works.
>> Best Regards - Bob Duke
>> ----- Original Message ----- From: "German Erlenkamp"
>> <german.erlenkamp.pharmazie.uni-halle.de>
>> To: "Amber User" <amber.ambermd.org>
>> Sent: Tuesday, May 05, 2009 8:40 AM
>> Subject: [AMBER] Problems with PMEMD installation for AMBER10
>>
>>
>>> Hi Amber-Users.
>>>
>>> I'm trying to install PMEMD for AMBER10.
>>> I made
>>>
>>> ./configure linux_em64t ifort lam
>>>
>>> and the
>>>
>>> make install
>>>
>>> When it comes to the part:
>>>
>>> /lib/cpp -traditional -P -I/cvos/shared/apps/amber/9/openmpi//include \
>>> -DPUBFFT -DMPI -DSLOW_NONBLOCKING_MPI -DDIRFRC_EFS -DDIRFRC_COMTRANS \
>>> -DDIRFRC_NOVEC -DFFTLOADBAL_2PROC pmemd.fpp pmemd.f90
>>> mpif90 -c -auto -xT -ip -O3 pmemd.f90
>>>
>>> nothing more happen. The only way to stop this is to kill the process.
>>>
>>> I used the same procedure for AMBER9 and it worked pretty well.
>>>
>>> How can I solve this problem?
>>>
>>> Thanks in advance.
>>>
>>> German
>>>
>>>
>>> --
>>> German Erlenkamp
>>> Institut fuer Pharmazeutische Chemie
>>> Martin-Luther-Universitaet Halle
>>> Wolfgang-Langenbeck-Str.4
>>> 06120 Halle/ Saale
>>>
>>> E-Mail: german.erlenkamp.pharmazie.uni-halle.de
>>> Phone: (49)345 - 55 25 043
>>>
>>> _______________________________________________
>>> AMBER mailing list
>>> AMBER.ambermd.org
>>> http://lists.ambermd.org/mailman/listinfo/amber
>>
>>
>>
>> _______________________________________________
>> AMBER mailing list
>> AMBER.ambermd.org
>> http://lists.ambermd.org/mailman/listinfo/amber
>
> --
> German Erlenkamp
> Institut fuer Pharmazeutische Chemie
> Martin-Luther-Universitaet Halle
> Wolfgang-Langenbeck-Str.4
> 06120 Halle/ Saale
>
> E-Mail: german.erlenkamp.pharmazie.uni-halle.de
> Phone: (49)345 - 55 25 043
>
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
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Received on Wed May 20 2009 - 14:43:25 PDT
