> Do you mean that the flag -openmpi in ./configure (which was ok for
> openmpi 1.2.6) is no good for version 1.3.1, as I used now?
I wouldn't even dare guess. The only places in the entire AMBER source
tree in which I see any mentions of OpenMPI are in the configure_amber
script and they're not very specific.
> As far as the installation of openmpi 1.3.1 is concerned, the tests passed:
>
> ompi_info | grep libnuma
> MCA affinity: libnuma (MCA v 2.0, API 2.0)
>
> ompi_info | grep maffinity
> MCA affinity: first use (MCA as above)
> MCA affinity: libnuma as above.
That's not interesting. Can you run an actual MPI program (other than
AMBER)?
--
Atro Tossavainen (Mr.) / The Institute of Biotechnology at
Systems Analyst, Techno-Amish & / the University of Helsinki, Finland,
+358-9-19158939 UNIX Dinosaur / employs me, but my opinions are my own.
< URL : http : / / www . helsinki . fi / %7E atossava / > NO FILE ATTACHMENTS
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Received on Wed Apr 08 2009 - 01:12:07 PDT
