Re: AMBER: distance restraint between non-bonded molecules]

From: Ilyas Yildirim <yildirim.pas.rochester.edu>
Date: Fri, 19 Dec 2008 18:06:35 -0500 (EST)

Taufik,

I tried a couple tests on your structure, and whether I use a group of
atoms or single atom to define at1 or at2, everything works fine. Did you
try to re-install amber and see if that will solve the problem? If not, I
will send you all the tests I've done. I am using amber9 by the way.

On Fri, 19 Dec 2008, Taufik Al-Sarraj wrote:

> Potentially dangerous attachments were identified and removed from this
> message.
>
> of course,
>
> RSTdel is the original RST file and RST4 is the one i modified manually
> to have the correct atom number.
>
> Best,
> Taufik
> 

-- 
  Ilyas Yildirim, Ph.D.
  ---------------------------------------------------------------
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  =                              - University of Rochester      =
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  = http://www.pas.rochester.edu/~yildirim/                     =
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Received on Fri Dec 19 2008 - 18:46:11 PST
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