Dear Amber Community,
I want to simulate 2'-5'-branched RNA. How can I prepare in easy way the prmtop and inpcrd files? 
Any help will be much appreciated.
Thanks, 
Volodymyr 
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Dr. Volodymyr Nechyporuk-Zloy  
University of Aarhus 
Interdisciplinary Nanoscience Center (iNANO)  
Ny Munkegade, Building 1521,  
DK-8000, Aarhus C, Denmark 
Phone: (+45 )8942 5535       Fax: (+45 )8942 3690 
E-mails: vzloy.yahoo.com, vnz.inano.dk
Web: http://focus-on-single-molecule.info
      
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Received on Wed Oct 29 2008 - 05:07:47 PDT