hi,
I am trying to generate a new residue using antechamber. How do I
specify which are the head and tail atoms? I am having trouble with
this. I can generate a single residue, for ex. by terminating the chain
with H, but not one that is joined to other residues. I believe the
tutorials on-line use xleap for this. Is it possible to use antechamber?
One tutorial says I will need the file mainchain.dat.
If so, what are the omit_name atoms?
thanks, Marcela
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber.scripps.edu
To unsubscribe, send "unsubscribe amber" (in the *body* of the email)
to majordomo.scripps.edu
Received on Fri Oct 17 2008 - 05:11:53 PDT
