average distance from center of mass. it's a measure of how compact
the structure is, used mostly when large changes occur such as during
folding.
On Fri, Oct 10, 2008 at 7:27 AM, Beale, John <jbeale.stlcop.edu> wrote:
> Can someone tell me what the "radius of gyration" for a protein in an MD
> simulation tells me? I see this parameter frequently in the literature but
> haven't found a good explanation.
>
>
>
> John
>
>
>
>
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber.scripps.edu
To unsubscribe, send "unsubscribe amber" (in the *body* of the email)
to majordomo.scripps.edu
Received on Sun Oct 12 2008 - 05:12:33 PDT
