AMBER: changing pdb structure

From: <>
Date: Thu, 09 Oct 2008 22:35:07 -0400

This is a general question.

If i take a structure from the protein data bank, and the structure
contains a protein and a DNA, is there a a software or a relatively
simple method for modifying the protein sequence or the DNA sequence,
e.g. changing an A to L (Protein) or changing a T to A (DNA). Short of
manual modification in xleap or deleting the original DNA and creating
a new one.


The AMBER Mail Reflector
To post, send mail to
To unsubscribe, send "unsubscribe amber" (in the *body* of the email)
Received on Sun Oct 12 2008 - 05:11:14 PDT
Custom Search