Hi,
I have added the path for MPI_HOME and after doing that I got another error as follows:
_________________________________________________________________________
[saurabh.mg01 src]$ make parallel
Starting installation of Amber9 (parallel) at Wed Sep 3 15:27:31 IST 2008.
cd sander; make parallel
make[1]: Entering directory `/gpfs/home/saurabh/amber9/src/sander'
../checkparconf
cpp -traditional -I/opt/openmpi/1.2.6/intel_10.1/tcp/64/bin/include -P -DMPI evb_init.f > _evb_init.f
ifort -c -w95 -mp1 -O0 -FR -o evb_init.o _evb_init.f
fortcom: Error: _evb_init.f, line 171: Cannot open include file 'mpif-common.h'
include 'mpif-common.h'
--------------^
fortcom: Error: _evb_init.f, line 321: This name does not have a type, and must have an explicit type. [MPI_INTEGER]
call mpi_bcast ( ndim, 1, MPI_INTEGER, 0, commworld, ierr )
-----------------------------^
fortcom: Error: _evb_init.f, line 361: This name does not have a type, and must have an explicit type. [MPI_DOUBLE_PRECISION]
call mpi_bcast ( xdat_dia(n)% q, ndim, MPI_DOUBLE_PRECISION, 0, commworld, ierr )
------------------------------------------------^
fortcom: Error: _evb_init.f, line 366: This name does not have a type, and must have an explicit type. [MPI_CHARACTER]
call mpi_bcast ( xdat_dia(n)% filename, 512, MPI_CHARACTER, 0, commworld, ierr )
------------------------------------------------------^
compilation aborted for _evb_init.f (code 1)
make[1]: *** [evb_init.o] Error 1
make[1]: Leaving directory `/gpfs/home/saurabh/amber9/src/sander'
make: *** [parallel] Error 2
________________________________________________________________________
Please help me solving this it. Thanking you in advance.
Regards,
Saurabh
--- On Tue, 2/9/08, Vlad Cojocaru <Vlad.Cojocaru.eml-r.villa-bosch.de> wrote:
From: Vlad Cojocaru <Vlad.Cojocaru.eml-r.villa-bosch.de>
Subject: Re: AMBER: AMBER9 installation problen with open mpi
To: amber.scripps.edu
Date: Tuesday, 2 September, 2008, 5:30 PM
Did you set the MPI_HOME variable to point to your installation of
openmpi ?
export MPI_HOME=/[path]/[to]/[mpi] (for bash shell)
Also make sure that your mpif90 compiler is in your path
export PATH=$MPI_HOME/bin:$PATH (for bash shell)
vlad
saurabh agrawal wrote:
Dear Amber Users,
I am trying to install AMBER9 on IBM cluster using openmpi. I am
getting the following error during installation:
--------------------------------------------------------------------------------------------------------------------------
Starting installation of Amber9 (parallel) at Tue Sep 2 12:24:05 IST
2008.
cd sander; make parallel
make[1]: Entering directory `/gpfs/home/saurabh/amber9/src/sander'
.../checkparconf
cpp -traditional -I/opt/openmpi//include -P -DMPI evb_init.f >
_evb_init.f
evb_init.f:18: error: mpif.h: No such file or directory
make[1]: *** [evb_init.o] Error 1
make[1]: Leaving directory `/gpfs/home/saurabh/amber9/src/sander'
make: *** [parallel] Error 2
----------------------------------------------------------------------------------------------------------------------
I appreciate if some one help me in this regard.
Saurabh
Unlimited freedom, unlimited storage. Get
it now
--
----------------------------------------------------------------------------
Dr. Vlad Cojocaru
EML Research gGmbH
Schloss-Wolfsbrunnenweg 33
69118 Heidelberg
Tel: ++49-6221-533266
Fax: ++49-6221-533298
e-mail:Vlad.Cojocaru[at]eml-r.villa-bosch.de
http://projects.villa-bosch.de/mcm/people/cojocaru/
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Received on Sun Sep 07 2008 - 06:07:11 PDT
