Did you set the MPI_HOME variable to point to your installation of openmpi ?
export MPI_HOME=/[path]/[to]/[mpi] (for bash shell)
Also make sure that your mpif90 compiler is in your path
export PATH=$MPI_HOME/bin:$PATH (for bash shell)
vlad
saurabh agrawal wrote:
> Dear Amber Users,
>
> I am trying to install AMBER9 on IBM cluster using openmpi. I am
> getting the following error during installation:
> --------------------------------------------------------------------------------------------------------------------------
> Starting installation of Amber9 (parallel) at Tue Sep 2 12:24:05 IST
> 2008.
> cd sander; make parallel
> make[1]: Entering directory `/gpfs/home/saurabh/amber9/src/sander'
> ../checkparconf
> cpp -traditional -I/opt/openmpi//include -P -DMPI evb_init.f >
> _evb_init.f
> evb_init.f:18: error: mpif.h: No such file or directory
> make[1]: *** [evb_init.o] Error 1
> make[1]: Leaving directory `/gpfs/home/saurabh/amber9/src/sander'
> make: *** [parallel] Error 2
>
> ----------------------------------------------------------------------------------------------------------------------
> I appreciate if some one help me in this regard.
>
> Saurabh
>
>
> ------------------------------------------------------------------------
> Unlimited freedom, unlimited storage. Get it now
> <http://in..rd.yahoo.com/tagline_mail_2/*http://help.yahoo.com/l/in/yahoo/mail/yahoomail/tools/tools-08.html/>
--
----------------------------------------------------------------------------
Dr. Vlad Cojocaru
EML Research gGmbH
Schloss-Wolfsbrunnenweg 33
69118 Heidelberg
Tel: ++49-6221-533266
Fax: ++49-6221-533298
e-mail:Vlad.Cojocaru[at]eml-r.villa-bosch.de
http://projects.villa-bosch.de/mcm/people/cojocaru/
----------------------------------------------------------------------------
EML Research gGmbH
Amtgericht Mannheim / HRB 337446
Managing Partner: Dr. h.c. Klaus Tschira
Scientific and Managing Director: Prof. Dr.-Ing. Andreas Reuter
http://www.eml-r.org
----------------------------------------------------------------------------
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber.scripps.edu
To unsubscribe, send "unsubscribe amber" (in the *body* of the email)
to majordomo.scripps.edu
Received on Wed Sep 03 2008 - 06:07:43 PDT
