Dear Luo,
Thank you very much for your attention. If I use ff03ua force field, run Antechamber ( like in TUTORIAL B4 ) in order to generate prepin file with doing the same procedure and write my own UA force field parameters in frcmod file Will I have used the United atom force field that I'm planning to use for n-alkanes ?
Thanks in advance
Adrien
----- Original Message ----
From: Ray Luo <rluo.uci.edu>
To: amber.scripps.edu
Cc: rluo.uci.edu
Sent: Friday, August 22, 2008 8:37:38 PM
Subject: Re: AMBER: united atom force field
Adrien,
There is the ff03ua UA force field in Amber 9 and 10, but it was
developed for proteins. There is no general UA field field planned in
Amber. However, you can certainly follow the ff03ua strategies to
develop your parm/prepin files for n-alkanes.
All the best,
Ray
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber.scripps.edu
To unsubscribe, send "unsubscribe amber" (in the *body* of the email)
to majordomo.scripps.edu
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber.scripps.edu
To unsubscribe, send "unsubscribe amber" (in the *body* of the email)
to majordomo.scripps.edu
Received on Sun Aug 24 2008 - 06:08:04 PDT