Hi All,
I have a simple query regarding .parmtop file. I have generated a
.parmtop file by amber leap program for run a simulation of TIP3P(rigid)
water box. But when have I checked the .parmtop file of that system, It was
showing no angle parameter. But actually the system has n(no of water
molecules) angle parameters. I have also checked for SPCE(flexible) water
box but it was showing similar thing. I am curious to know, why these angle
parameter topology informations are not showing? Are these informations
really compensate during simulation? I am eager for your early reply.
Thanks and regards
Sudipta
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber.scripps.edu
To unsubscribe, send "unsubscribe amber" (in the *body* of the email)
to majordomo.scripps.edu
Received on Wed Jul 30 2008 - 06:07:24 PDT
