Thank you.
OS: Ubuntu 6.06.1 LTS
Compiler: gcc version 3.4.6 (Ubuntu 3.4.6-1ubuntu2)
Option: ./configure_at gcc
When I run the test of amber tools 1.2, I've got the following error.
=========================
cd ptraj_matrix && ./Run.matrix
ptraj: analyze fluctuation matrices
Segmentation fault
./Run.matrix: Program error
make: *** [test.ptraj] Error 1
=========================
The following is the output of ptraj
++++++++++++++++++++++++++
ANALYZE
1> ANALYZE MATRIX: Analyzing matrix 1rrb_vac_mwcovarmat and dumping
results to 1rrb_vac_mwcovarmat_evecs.dat
Calculating 5 eigenvectors and thermodynamic data
2> ANALYZE MATRIX: Analyzing matrix 1rrb_vac_distcovarmat and dumping
results to 1rrb_vac_distcovarmat_evecs.dat
Calculating 5 eigenvectors and no thermodynamic data
Eigenvectors will be reduced
Processing AMBER trajectory file 1rrb_vac.mdcrd
Set 1 ..........
++++++++++++++++++++++++++
All others are passed.
On Mon, Jul 21, 2008 at 7:36 PM, David A. Case <case.scripps.edu> wrote:
> On Mon, Jul 21, 2008, Myunggi Yi wrote:
> >
> > When I run the test of amber tools 1.2, I've got the following error.
> >
> >
> > =========================
> > cd ptraj_matrix && ./Run.matrix
> >
> > ptraj: analyze fluctuation matrices
> > Segmentation fault
> > ./Run.matrix: Program error
> >
> > make: *** [test.ptraj] Error 1
>
> What compiler, OS? What options did you pass to configure_at?
>
> ...dac
>
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--
Best wishes,
Myunggi Yi
==================================
KLB 419
Institute of Molecular Biophysics
Florida State University
Tallahassee, FL 32306
Office: (850) 645-1334
http://www.scs.fsu.edu/~myunggi
myunggi.gmail.com
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Received on Sun Jul 27 2008 - 06:07:34 PDT
