If you have a trajectory you could use the mm-pbsa module in Amber. Look at
mm-pbsa tutorial on amber tutorial website
CG
On Wed, Jul 16, 2008 at 11:54 AM, Boutheina Kerkeni <b.kerkeni.ucl.ac.uk>
wrote:
> Hi
>
> Does any one knows how to compute the free energy profile with Amber?
> Thanks
> Regards
> Boutheina
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Received on Sun Jul 20 2008 - 06:07:12 PDT