Dear Chris,
Is there a need for me to install MDDisplay, or is NMDisplay completely independent?
Thank you,
Nadia
________________________________________
From: owner-amber.scripps.edu [owner-amber.scripps.edu] On Behalf Of Chris Moth [chris.moth.vanderbilt.edu]
Sent: 09 July 2008 20:45
To: amber.scripps.edu
Cc: amber.scripps.edu
Subject: AMBER: analysing normal modes
NMDisplay, a sister product for MDDisplay that I am just about to publish
to the list, does this quite nicely.
What platform do you use? I'll send you the new files you need and draft
instructions.
http://structbio.vanderbilt.edu/~mothcw/mddisplay/
> Dear amber users,
>
> Apart from IED, are there any other tools or scripts that can be used to
> generate frames along normal modes caluclated by nmode (amber) or NAB?
> I can use ptraj to generate fluctuation plots along the normal modes but I
> am interested in generating frames to visualise.
>
> Thank you in advance for your help,
>
> Nadia
>
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Received on Sun Jul 13 2008 - 06:07:27 PDT
