AMBER: AMBER7 Si atom type

From: Taufik Al-Sarraj <>
Date: Wed, 12 Dec 2007 12:30:49 -0500

I want to model DNA on Si surface (it will be fixed during the
minimization and dynamics) but i don't know the atom type for Silicone.
Since it (the surface) will be restrained can i simply use Si. would i
add that in xleap using the steps outlined in tutorial 4. or can i
update leaprc.ff99?

i am using Amber 7

Best wishes,

Chemical Sensors Group
University of Toronto, Mississauga
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Received on Sun Dec 16 2007 - 06:07:07 PST
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