Re: AMBER: nmode ntrun=2

From: David A. Case <case.scripps.edu>
Date: Wed, 5 Dec 2007 09:58:34 -0800

On Wed, Dec 05, 2007, JM Beames wrote:
>
> I am trying to run a transition state search using nmode in amber9. The
> molecule that I'm currently using runs happily in ntrun=1 and ntrun=4 but
> whenever I try and use ntrun=2 I get a segmentation fault.

First, this is 20-year-old code that hasn't been used much. No excuses, but
I'm not surprised that bad things might happen. When it was written, 78 atoms
was actually a lot for second-derivative analysis.

Second, can you post a test case that fails? We can't help until we can
reproduce the problem....

...thanks...dac

-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber.scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo.scripps.edu
Received on Sun Dec 09 2007 - 06:07:12 PST
Custom Search