AMBER: Umbrella Sampling for the twist angle of a DNA base pairs

From: Catein Catherine <>
Date: Wed, 30 May 2007 23:11:36 +0800

Dear All,

Did anyone got experiences on constructing a umbrella sampling for
the twist angle of a flanking DNA base pairs. Should I change the dihedral
angle of four atoms? or Should I change the center of mass for two flanking
base pairs instead?

Best regards

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Received on Sun Jun 03 2007 - 06:07:08 PDT
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