Re: AMBER: Ionic strength in pbsa

From: Qizhi Cui <qzcui.scripps.edu>
Date: Tue, 22 May 2007 13:21:27 -0700 (PDT)

Hi Shaowen,

I noticed this problem before. I traced down the source code and found
that in the mm-pbsa input file, "ISTRNG" should be replaced by "SALT".

Qizhi

> Dear All,
>
> Anybody know whether the ionic concentration has been considered in the
> pbsa suite of AMBER9? I changed the "ISTRNG" but got no change in the
> ouput. Thanks.
>
> Shaowen Hu, Ph.D.
> Research Scientist
> USRA Division of Space Life Sciences
> 3600 Bay Area Blvd., Houston, TX 77058, USA
> Phone: 281-483-1163
> -----------------------------------------------------------------------
> The AMBER Mail Reflector
> To post, send mail to amber.scripps.edu
> To unsubscribe, send "unsubscribe amber" to majordomo.scripps.edu
>



-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber.scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo.scripps.edu
Received on Wed May 23 2007 - 06:07:42 PDT
Custom Search