This is not an error or warning, it is just for information purpose.
All the best
Junmei
From: owner-amber.scripps.edu [mailto:owner-amber.scripps.edu] On Behalf
Of Yao Xin
Sent: Tuesday, May 22, 2007 8:40 AM
To: amber.scripps.edu
Subject: AMBER: antechamber question
Dear Amber Team,
I am making a .off file for a modified nucleotide.
>antechamber -i odup.log -fi gout -o OdU_gaff.ac -fo ac
it said:
"Bond types are assigned for valence state 4 with penalty of
2."
Could you tell me what does this message mean? Do I need
to fix some error? Thank you for your help.
Best Wishes,
Yao Xin
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Received on Wed May 23 2007 - 06:07:39 PDT
