AMBER: rigid epoxide substrate

From: Dr M. Blomberg <mb635.cam.ac.uk>
Date: 20 Apr 2007 12:24:13 +0100

My substate contains an epoxide ring and I wonder how to treat the dihedral
force constants for the rigid part of the molecule. Using gaff strange
dihedral angles appears in the frcmod file, what should I do with these?


Best regards,

Mattias Blomberg
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber.scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo.scripps.edu
Received on Sun Apr 22 2007 - 06:07:40 PDT
Custom Search