From: Anju Sharma <>
Date: Tue, 13 Feb 2007 15:38:01 +0530

Aftr installation of Amber8 i tried running the first tutorial bt got stuck
in the first command only.
I created file which contain my DNA sequence.
Next step is to create DNA structure using synatx:

$AMBERHOME/exe/nucgen -O -i -o nuc.out -d
$AMBERHOME/dat/leap/parm/nucgen.dat -p nuc.pdb

error m getting is /exe/nucgen is not valid file or directory... tried all
the options to the best of my knowledge...but in vain.
Please help me out how to continue...

Anju Sharma
The AMBER Mail Reflector
To post, send mail to
To unsubscribe, send "unsubscribe amber" to
Received on Wed Feb 14 2007 - 06:07:36 PST
Custom Search