AMBER: Having trouble with Nucgen for generating pdb more than 16 bps

From: <amit.mbu.iisc.ernet.in>
Date: Mon, 31 Jul 2006 00:21:05 +0530 (IST)

Dear Amber Users,
   Nucgen is not able to generate a pdb file for a dsDNA of bp more 16. Is
there any way out of this. I have some 42 bps. How do i generate a pdb file
for this. I am attaching the input(nuc.in) and output (nuc.out) files it
generated.
thank in advance,

amit

-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber.scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo.scripps.edu
Received on Wed Aug 02 2006 - 06:07:02 PDT
Custom Search