RE: AMBER: sander problem

From: Thomas E. Cheatham, III <>
Date: Thu, 16 Feb 2006 14:12:39 -0700 (Mountain Standard Time)

> ~/amber8/polyAT_gb_md1_nocut$ process_mdout.perl
> ../polyAT_gb_md1_nocut.out
> -bash: process_mdout.perl: command not found

The perl referred to in that file (as specified by the #!/usr/bin/perl) is
probably pointing to the wrong place...

You can either change this to be (if perl is in your path)


or the correct path (for example)


or just type

  perl process_mdout.perl *.out
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Received on Sun Feb 19 2006 - 06:10:18 PST
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