Dear AMBER forum,
I am interested in understanding the format of the prepi file as depicted below:
    0    0    2
This is a remark line
molecule.res
SUS    INT  0
CORRECT     OMIT DU   BEG
  0.0000
   1  DUMM  DU    M    0  -1  -2     0.000      .0        .0      .00000
   2  DUMM  DU    M    1   0  -1     1.449      .0        .0      .00000
   3  DUMM  DU    M    2   1   0     1.522   111.1        .0      .00000
   4  C2    ca    M    3   2   1     1.540   111.208   180.000  -0.17826
   5  C1    ca    M    4   3   2     1.386    86.897  -162.979  -0.04968
   6  H1    ha    E    5   4   3     1.072   120.119    25.599   0.16937
   7  C14   ca    M    5   4   3     1.379   119.724  -154.668  -0.01913
 etc
What does the first line 0 0 2 mean?  Where can I find more information about this and other file types?
Regards,
Mike
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Received on Thu Feb 02 2006 - 06:10:05 PST