REAMBER: the problem of mdcrd

From: xiphias xie <xiphiasxp.yahoo.com.cn>
Date: Tue, 17 Jan 2006 15:52:03 +0800 (CST)

> 1) You initial coordinates are a long way from the
> the origin. Create a pdb
> file from the inpcrd file and see what you get for
> the typical coordinate
> range. If your initial system is a close to
> exceeding the limit then try
> using ptraj to recenter this coordinates and create
> a new inpcrd file.
How can i use ptraj to recenter coordinates ?
like this ?
trajin *.inpcrd
trajout *.inpcrd

thanks in advance!



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Received on Wed Jan 18 2006 - 06:10:06 PST
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