AMBER: how to reduce box size and delete excess solvent

From: hj zou <hjzou.iris3.simm.ac.cn>
Date: Sun, 15 May 2005 19:51:32 +0800

Dear amber users:
  I would like to reduce the size of the bounding box (periodic BC) and delete all solvents which don't fit inside new box. How to achieve it? Can anyone furnish a script?
  Your suggestions will be highly appreciated.

                        
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Hanjun Zou
555 Zu Chong Zhi Road, Zhangjiang Hi-Tech Park
Drug Discovery and Design Center
Shanghai Institute of Meteria Medica
Chinese Academy of Sciences
Shanghai 201203, China
Telú║ +86-21-50806600-1201
E-mail: hjzou.mail.shcnc.ac.cn
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Received on Sun May 15 2005 - 13:53:00 PDT
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