Just a thought:
Dont you have to run your mpi-compiled version of sander with the mpirun
command (i.e. mpirun -np $num_procs /full/path/to/sander $options)?
Do you get the same error when ran like this?
David LeBard
On Thu, 2005-04-14 at 13:00, Joe Nolan wrote:
> Dear Amber community,
> Our installation of Amber8 was set up to work with Mpich2 via:
>
> >./configure -mpich
>
> with MPICH_HOME pointing to the Mpich2 directory. Subsequently the
> "make parallel" step was undertaken and all went smoothly. However,
> upon attempting to run sander the following error is reported:
>
> >huey# sander -O -i min2.in -o min2.out -p \
> >2c9_114mutantCminfix1solvateions_flp.top -c \
> >2c9_114mutantCminfix1solvateions_flp.crd -r \
> >2c9_114mutantCminfix1solvateions_flp.rst &
> >[1] 633
> >huey# mpd_singinit: execv failed: No such file or directory
>
> My best guess is that with Mpich2 the "mpd_singinit" command is named
> as something else. Any and all help would be greatly appreciated, as
> always! - Msgr.E.J.Nolan IV
>
>
>
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Received on Thu Apr 14 2005 - 21:53:00 PDT
