Thanks Dr. Ross:
>
>The latest version of VMD (http://www.ks.uiuc.edu/Research/vmd/) can do an
>RMS fit of different structures. This can also read amber format files. You
>can, for example, load several structures and superimpose them all by RMS
>fitting specific atoms. E.g. Alpha-Carbons.
>
Does VMD also write an output with all the atoms superimposed/ transformed
coordinates and with the same names as input file, esp. for hydrogens?
Though I have to try using the latest version of VMD you mentioned..
Cheers,
Vineet
_________________________________________________________________
Express yourself instantly with MSN Messenger! Download today it's FREE!
http://messenger.msn.click-url.com/go/onm00200471ave/direct/01/
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber.scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo.scripps.edu
Received on Mon Jan 17 2005 - 10:53:01 PST
