Hi -
>
> 1) does the original (non-carnal) trajectory work?
No, it doesn't work with the original trajectory either.
> 2) try viewing the trajectory and checking to make sure
> the format is ok. The trajectory format is given on the
> AMBER web site.
Yes, the file is in the right format.
Joseph
>
> carlos
>
> ----- Original Message -----
> From: "Joseph Nachman" <nachman.hera.med.utoronto.ca>
> To: <amber.scripps.edu>
> Sent: Tuesday, June 15, 2004 2:11 PM
> Subject: AMBER: MOIL-View question
>
>
> > hello all -
> >
> > I'm trying to visualize a trajectory generated by Carnal (Amber6 version)
> > in MOIL-View.9.1. However, when I try to load the trajectory I get a
> > message that the file is not in AMBER format, although it is in AMBER
> > trajectory format and it works when I used it in either Carnal or ptraj.
> > The file contains no periodic box info. Any ideas?
> >
> > Thanks in advance,
> >
> > Joseph
> >
> > --
> > --------------------------------------------------------------------
> > Joseph Nachman Department of Biochemistry
> > nachman.hera.med.utoronto.ca University of Toronto
> > Medical Sciences Building
> > tel: +1 416 978-5510 Toronto, Ontario M5S 1A8
> > fax: +1 416 978-8548 Canada
> > --------------------------------------------------------------------
> >
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> >
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--
--------------------------------------------------------------------
Joseph Nachman Department of Biochemistry
nachman.hera.med.utoronto.ca University of Toronto
Medical Sciences Building
tel: +1 416 978-5510 Toronto, Ontario M5S 1A8
fax: +1 416 978-8548 Canada
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Received on Wed Jun 16 2004 - 21:53:00 PDT
