AMBER: amber8 performance on linux cluster

From: quch quch <quch0.yahoo.com>
Date: Tue, 27 Apr 2004 10:05:45 -0700 (PDT)

Hello,
I have tried to compile the amber8 at linux cluster
with intel compiler and mpich, however, the
performance is very poor for sander, usually around
30% or less CPU usage for each CPU. If I use only one
CPU, the usage is above 90%. I am not sure this is
common for parallel sander in linux? or is it problem
from mpich?
Thanks,
Chen



        
                
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Received on Tue Apr 27 2004 - 18:53:00 PDT
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