MGB RADII PARAMETRIZATION

From: Obdulia Rabal <mrabal.iqs.es>
Date: Tue, 3 Jun 2003 13:08:15 +0200

Hi.

I have a question about MGB radii parametrization for small organic
molecules parametrizazed with GAFF force field.

I don't know where parameters come for H and O elements (for N, C and P they
are the same as described in Jayaram.1998 and as they appear to be in
amber7/src/leap/src/leap/unitio.c).

Is there any "additional" parametrization or maybe there is a problem with
GAFF atom types in lower-case, as reported in Bugfix 24 for amber 7.


Thanks in advance.

Obdulia Rabal
Received on Tue Jun 03 2003 - 12:53:01 PDT
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