I am trying to read in a PDB file with more than 10000 residues (about
18000 water molecules) and am running into the following problem (see
error message below). Any suggestions for getting around the problem?
I apologize if this has been discussed previously, but a search of mail
archives did not help.
--------
> complex = loadpdb complex.pdb
Loading PDB file: ./complex.pdb
-- residue 10000: duplicate [] atoms (total 26739)
ATOM NAMES IN EACH RESIDUE MUST BE UNIQUE:
(same-name atoms are reduced to a single atom)
Unknown residue: number: 9999 type: Terminal/last
..relaxing end constraints to try for a dbase match
-no luck
Creating new UNIT for residue: sequence: 10000
Created a new atom named: within residue: .R< 10000>
total atoms in file: 61641
The file contained 1 atoms not in residue templates
--------
__________________________________________________
Do You Yahoo!?
Yahoo! Health - Feel better, live better
http://health.yahoo.com
Received on Tue Aug 06 2002 - 12:50:04 PDT
