Re: PME with octahedral box

From: David Konerding <>
Date: Tue 20 Mar 2001 10:43:11 -0800

Ann Hermone writes:
>Content-Type: text/plain; charset="us-ascii"
>Dear Amber users,
> This is just to clarify on my last message. It wasn't a parallel job.
>I'm attaching the input file. It seemed to run fine ( finished with no errors)
>with a box size of 50.9 angstroms.
>Any insight would be appreciated.
>Thanks again.

I bet you're running up against a software memory limit. There are several ways around
this, I would check with your system administrator to learn how to ncrease your
memory limit. Most shells have a command "unlimit" or "ulimit" (see the man page for
your shell) which helps you remove stack or memory limits. I'd guess either
"unlimit -s unlimited" or "ulimit -s unlimited" would do the job.
Received on Tue Mar 20 2001 - 10:43:11 PST
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