On Sun, Jan 04, 2026, Adrian Roitberg via AMBER wrote:
>Look at https://github.com/dacase/nabc
Better is
https://github.com/Amber-MD/AmberClassic. The old "nabc"
repository is obsolete, and I guess I should just remove it.
Note, however, the the NAB code was written 30 years ago. It serves a very
limited purpose now: use the fd_helix routine if you want to build a simple
A or B form helix with a given sequence.
But for many purposes, modern sequence-to-structure approaches, based on
training artificial neural networks, may be more likely to meet users'
needs.
>
>On 1/3/26 8:39 AM, James Kress via AMBER wrote:
>>
>>Good question. Also, some detailed examples of how to use the new DNA
>>sequence generator would be welcome as well.
Not sure what is meant by the "new DNA sequence generator".
....dac
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Sun Jan 04 2026 - 13:00:04 PST
