[AMBER] job run error

From: Dulal Mondal via AMBER <amber.ambermd.org>
Date: Fri, 12 Sep 2025 16:37:29 +0530

Dear Experts,
My input file (mdin) like below:
Enable REAF using ifreaf=1.
&cntrl
 icnstph=2, dt=0.001, imin=0,
 nstlim=2000, ig=4289, ntb=1, numexchg=2000,
 ntwx=1000, irest=1, iwrap=1,ioutfm=1,ntxo=2,
 cut=10.0, ntcnstph=1000, ntpr=1000,
 ntx=5, solvph=5.5, saltcon=0.1, ntt=3, ntrelax=200,
 gamma_ln=2.0, temp0=300.0, tempi=300,ntp=0,
 *ifreaf=1,*
 reaf_temp=310,
 reaf_mask1=':7,40,51,88,114,127,190,193,117,107&!.N,CA,C,O,H',
 gti_add_re=2,
/
But I got the following error:

/bin/bash: /home/srabanimd/anaconda3/lib/libtinfo.so.6: no version
information available (required by /bin/bash)
           0
           0
           0
           0
           0
           0
           0
           0
           0
           0
           0
           0
           0
           0
           0
           0
           0
           0
           0
           0
           0
           0
           0
           0
--------------------------------------------------------------------------
Primary job terminated normally, but 1 process returned
a non-zero exit code. Per user-direction, the job has been aborted.
--------------------------------------------------------------------------
--------------------------------------------------------------------------
mpirun detected that one or more processes exited with non-zero status,
thus causing
the job to be terminated. The first process to do so was:

  Process name: [[63834,1],20]
  Exit code: 255
--------------------------------------------------------------------------

 Running multipmemd version of pmemd Amber24
    Total processors = 24
    Number of groups = 24

Error: invalid argument launching kernel kgBuildSpecial2RestNBPreList
Error: invalid argument launching kernel kgBuildSpecial2RestNBPreList
Error: invalid argument launching kernel kgBuildSpecial2RestNBPreList
Error: invalid argument launching kernel kgBuildSpecial2RestNBPreList
Error: invalid argument launching kernel kgBuildSpecial2RestNBPreList
Error: invalid argument launching kernel kgBuildSpecial2RestNBPreList
Error: invalid argument launching kernel kgBuildSpecial2RestNBPreList
Error: invalid argument launching kernel kgBuildSpecial2RestNBPreList
Error: invalid argument launching kernel kgBuildSpecial2RestNBPreList
Error: invalid argument launching kernel kgBuildSpecial2RestNBPreList
Error: invalid argument launching kernel kgBuildSpecial2RestNBPreList
Error: invalid argument launching kernel kgBuildSpecial2RestNBPreList
Error: invalid argument launching kernel kgBuildSpecial2RestNBPreList
Error: invalid argument launching kernel kgBuildSpecial2RestNBPreList
Error: invalid argument launching kernel kgBuildSpecial2RestNBPreList
Error: invalid argument launching kernel kgBuildSpecial2RestNBPreList
Error: invalid argument launching kernel kgBuildSpecial2RestNBPreList
Error: invalid argument launching kernel kgBuildSpecial2RestNBPreList
Error: invalid argument launching kernel kgBuildSpecial2RestNBPreList
Error: invalid argument launching kernel kgBuildSpecial2RestNBPreList
Error: invalid argument launching kernel kgBuildSpecial2RestNBPreList
Error: invalid argument launching kernel kgBuildSpecial2RestNBPreList
Error: invalid argument launching kernel kgBuildSpecial2RestNBPreList
Error: invalid argument launching kernel kgBuildSpecial2RestNBPreList
 I also upload the following files:

-- 
*With regards,*
*Dulal Mondal,*
*Research Scholar,*
*Department of Chemistry,*
*IIT Kharagpur, Kharagpur 721302.*





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Received on Fri Sep 12 2025 - 04:30:03 PDT
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