Hi,
As far as I can see, the message related to whatever caused the build
to fail isn't there. I'm guessing maybe you did a make with multiple
processes (i.e. make -jX) and the actual error message is buried in
the output before what was pasted.
Try re-running the make, but this time direct all the output to a file
that you can attach to your next email, e.g.
make -j4 install > install.log 2>&1
Hope this helps,
-Dan
On Thu, Apr 17, 2025 at 7:06 AM Russell Bertrand via AMBER
<amber.ambermd.org> wrote:
>
> Hi,
> I am trying install Amber24. In this processes I am encountering the following error message:
> [ 50%] Building CXX object AmberTools/src/cpptraj/src/CMakeFiles/cpptraj_common_obj_mpi.dir/Structure/StructureEnum.cpp.o
> [ 50%] Building CXX object AmberTools/src/cpptraj/src/CMakeFiles/cpptraj_common_obj_mpi.dir/Structure/StructureRoutines.cpp.o
> [ 50%] Building CXX object AmberTools/src/cpptraj/src/CMakeFiles/cpptraj_common_obj_mpi.dir/Structure/SugarBuilder.cpp.o
> [ 50%] Building CXX object AmberTools/src/cpptraj/src/CMakeFiles/cpptraj_common_obj_mpi.dir/Structure/Sugar.cpp.o
> [ 50%] Building CXX object AmberTools/src/cpptraj/src/CMakeFiles/cpptraj_common_obj_mpi.dir/Structure/SugarLinkAtoms.cpp.o
> [ 50%] Building CXX object AmberTools/src/cpptraj/src/CMakeFiles/cpptraj_common_obj_mpi.dir/Structure/SugarToken.cpp.o
> [ 50%] Building CXX object AmberTools/src/cpptraj/src/CMakeFiles/cpptraj_common_obj_mpi.dir/Structure/Zmatrix.cpp.o
> [ 50%] Built target cpptraj_common_obj_mpi
> make: *** [Makefile:156: all] Error 2
>
>
> My run_cmake options are as follows,
> cmake $AMBER_PREFIX/amber24_src \
> -DCMAKE_INSTALL_PREFIX=$AMBER_PREFIX/amber24 \
> -DCOMPILER=INTELLLVM \
> -DOPENMP=FALSE \
> -DBUILD_GUI=TRUE \
> -DMPI=TRUE -DCUDA=FALSE -DINSTALL_TESTS=TRUE \
> -DMPI_C_COMPILER=/opt/intel/oneapi/mpi/2021.15/bin/mpicc \
> -DMPI_CXX_COMPILER=/opt/intel/oneapi/mpi/2021.15/bin/mpicxx \
> -DMPI_Fortran_COMPILER=/opt/intel/oneapi/mpi/2021.15/bin/mpif90 \
> -DTRUST_SYSTEM_LIBS=mkl \
> -DMKL_HOME=/opt/intel/oneapi/mkl/2025.1 \
> -DDOWNLOAD_MINICONDA=TRUE \
> 2>&1 | tee cmake.log
> Could someone shed some light as to where/what I am doing wrong and how to troubleshoot and fix this?
> Many thanks
> Russell
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Received on Thu Apr 17 2025 - 06:00:02 PDT
