Dear Amber experts,
Sorry to have this question to bother you. Recently, I tried to install the Amber24 and AmberTool24 at both. When I finished the installation of serial version, I tried to run the pmemd command, but it complained as this below:
Program received signal SIGABRT: Process abort signal.
Backtrace for this error:
#0 0x7f7a18223970 in ???
#1 0x7f7a18222ad5 in ???
#2 0x7f7a17e4251f in ???
at ./signal/../sysdeps/unix/sysv/linux/x86_64/libc_sigaction.c:0
#3 0x7f7a17e969fc in __pthread_kill_implementation
at ./nptl/pthread_kill.c:44
#4 0x7f7a17e969fc in __pthread_kill_internal
at ./nptl/pthread_kill.c:78
#5 0x7f7a17e969fc in __GI___pthread_kill
at ./nptl/pthread_kill.c:89
#6 0x7f7a17e42475 in __GI_raise
at ../sysdeps/posix/raise.c:26
#7 0x7f7a17e287f2 in __GI_abort
at ./stdlib/abort.c:79
#8 0x7f7a18221295 in ???
#9 0x56250ad4ec6c in ???
#10 0x56250ad68f69 in ???
#11 0x56250ac339de in ???
#12 0x7f7a17e29d8f in __libc_start_call_main
at ../sysdeps/nptl/libc_start_call_main.h:58
#13 0x7f7a17e29e3f in __libc_start_main_impl
at ../csu/libc-start.c:392
#14 0x56250ac33a14 in ???
#15 0xffffffffffffffff in ???
Aborted (core dumped)
My operating system is Ubuntu22.04. My building environment includes gcc 9.5.0, gfortran 7.5.0, cmake 3.18.4.
By the way, when run sander engine, it also complained similar results.
And my machine can easily run Amber22 and Amber20. Please help me, I don't know why this happens.
Best regards,
Ning
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Received on Sat Mar 08 2025 - 11:00:02 PST
