[AMBER] Conversion factor in LJ parameters for RISM

From: angad sharma via AMBER <amber.ambermd.org>
Date: Tue, 4 Feb 2025 13:07:19 +0530

Dear AMBER users,

I am currently running RISM calculations using divalent magnesium (Mg²⁺)
ions. The initial parameters for Mg²⁺ are:
LJ Sigma: 1.360 (Angstrom)
LJ Epsilon: 0.01020237 (kcal/mol)

However, for the RISM calculation, these values are converted into the
following format:

%FLAG LJEPSILON
%FORMAT(5e16.8)
  8.94700001e-01

%FLAG LJSIGMA
%FORMAT(5e16.8)
  7.92600000e-01

I would like to understand the conversion process and how these values are
derived. Could someone please explain this transformation?

Thank you for your help!

Best regards

*-------------------------------------------------*
*With Regards*
*Angad Sharma*

*Research Scholar*
*School of Computational & Integrative Sciences*

*Jawaharlal Nehru University*
*New Delhi 110067, (INDIA)*
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Tue Feb 04 2025 - 00:00:02 PST
Custom Search