On Tue, Oct 29, 2024, Yasser Almeida via AMBER wrote:
>I checked the version of the MPI compilers and gcc and got this:
>
>(base) [myasalme.login build]$ mpif90 --version
>GNU Fortran (GCC) 11.2.1 20220127 (Red Hat 11.2.1-9)
>
>(base) [myasalme.login build]$ mpicc --version
>gcc (GCC) 11.2.1 20220127 (Red Hat 11.2.1-9)
>
>(base) [myasalme.login build]$ gcc --version
>gcc (GCC) 11.2.1 20220127 (Red Hat 11.2.1-9)
>
I'm not sure if you've fixed this yet or not. But one thing in your post
pops out at me:
>
>[ 39%] Building Fortran object AmberTools/src/quick/src/CMakeFiles/libquick_mpi.dir/modules/quick_mpi_module.f90.o
>f951: Fatal Error: Reading module ‘/cluster/intel/2020.1/compilers_and_libraries_2020.1.217/linux/mpi/intel64/include/mpi.mod’ at line 1 column 2: Unexpected EOF
Note the "fatal error" involves trying to load intel/2020.1 mpi modules.
It's not surprising that this will fail with the GNU compilers listed above.
I have no idea how this happened, but it may help to look for references in
Intel compilers in your environment (perhaps in LD_LIBRARY_PATH?)
...good luck...dac
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Received on Thu Oct 31 2024 - 08:30:02 PDT
